Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm45668-201ENSMUST00000211271 493 ntBASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgb4Q6P8W9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gm12585-201ENSMUST00000117307 290 ntBASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Mir6392-201ENSMUST00000184924 108 ntBASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gm18624-201ENSMUST00000220966 658 ntBASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb4Q6P8W9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hmgb4Q6P8W9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmgb4Q6P8W9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hmgb4Q6P8W9 Acot6-202ENSMUST00000222921 3622 ntBASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Gm43433-201ENSMUST00000196573 481 ntBASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb4Q6P8W9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb4Q6P8W9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms