Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm11439-201ENSMUST00000118598 409 ntBASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Gm24990-201ENSMUST00000157406 323 ntBASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slx4Q6P1D7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slx4Q6P1D7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Gm8337-201ENSMUST00000187358 1938 ntBASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slx4Q6P1D7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Gm12012-201ENSMUST00000118857 1066 ntBASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Mir6979-201ENSMUST00000183927 56 ntBASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Slx4Q6P1D7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC21.01■□□□□ 0.95
Slx4Q6P1D7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Slx4Q6P1D7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Slx4Q6P1D7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Slx4Q6P1D7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21■□□□□ 0.95
Slx4Q6P1D7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Gm45133-201ENSMUST00000207548 2773 ntBASIC21■□□□□ 0.95
Slx4Q6P1D7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC21■□□□□ 0.95
Slx4Q6P1D7 Gm5896-201ENSMUST00000189662 1024 ntBASIC21■□□□□ 0.95
Slx4Q6P1D7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC21■□□□□ 0.95
Slx4Q6P1D7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC21■□□□□ 0.95
Slx4Q6P1D7 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slx4Q6P1D7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slx4Q6P1D7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Slx4Q6P1D7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slx4Q6P1D7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slx4Q6P1D7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slx4Q6P1D7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms