Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VclQ64727 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VclQ64727 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.7□□□□□ -0.22
VclQ64727 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VclQ64727 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
VclQ64727 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.69□□□□□ -0.22
VclQ64727 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.69□□□□□ -0.22
VclQ64727 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.69□□□□□ -0.22
VclQ64727 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VclQ64727 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.69□□□□□ -0.22
VclQ64727 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VclQ64727 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VclQ64727 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.68□□□□□ -0.22
VclQ64727 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VclQ64727 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.68□□□□□ -0.22
VclQ64727 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VclQ64727 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Gm8584-201ENSMUST00000171982 758 ntBASIC13.68□□□□□ -0.22
VclQ64727 Gm9522-201ENSMUST00000182394 926 ntBASIC13.68□□□□□ -0.22
VclQ64727 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Gm29667-201ENSMUST00000190817 490 ntBASIC13.68□□□□□ -0.22
VclQ64727 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.68□□□□□ -0.22
VclQ64727 Gm10766-202ENSMUST00000194123 606 ntBASIC13.68□□□□□ -0.22
VclQ64727 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.68□□□□□ -0.22
VclQ64727 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.68□□□□□ -0.22
VclQ64727 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.68□□□□□ -0.22
VclQ64727 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.68□□□□□ -0.22
VclQ64727 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VclQ64727 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.67□□□□□ -0.22
VclQ64727 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VclQ64727 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.67□□□□□ -0.22
VclQ64727 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.67□□□□□ -0.22
VclQ64727 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.67□□□□□ -0.22
VclQ64727 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.67□□□□□ -0.22
VclQ64727 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VclQ64727 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms