Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AtmQ62388 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.88□□□□□ -0.35
AtmQ62388 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.88□□□□□ -0.35
AtmQ62388 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
AtmQ62388 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Gm14208-201ENSMUST00000119645 678 ntBASIC12.88□□□□□ -0.35
AtmQ62388 Gm10146-201ENSMUST00000072739 309 ntBASIC12.88□□□□□ -0.35
AtmQ62388 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
AtmQ62388 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.88□□□□□ -0.35
AtmQ62388 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.88□□□□□ -0.35
AtmQ62388 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AtmQ62388 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AtmQ62388 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AtmQ62388 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Gm3890-201ENSMUST00000182416 207 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.87□□□□□ -0.35
AtmQ62388 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
AtmQ62388 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
AtmQ62388 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.87□□□□□ -0.35
AtmQ62388 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Gm12616-201ENSMUST00000118594 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.87□□□□□ -0.35
AtmQ62388 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.87□□□□□ -0.35
AtmQ62388 Gm12624-201ENSMUST00000177615 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12621-201ENSMUST00000177760 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12615-201ENSMUST00000177970 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12622-201ENSMUST00000177975 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12627-201ENSMUST00000178412 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12625-201ENSMUST00000179122 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12614-201ENSMUST00000179586 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm12613-201ENSMUST00000180323 382 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.87□□□□□ -0.35
AtmQ62388 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AtmQ62388 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.87□□□□□ -0.35
AtmQ62388 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Sybu-209ENSMUST00000228639 4113 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
AtmQ62388 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.87□□□□□ -0.35
AtmQ62388 Gm8194-201ENSMUST00000159783 859 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
AtmQ62388 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.87□□□□□ -0.35
AtmQ62388 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.87□□□□□ -0.35
AtmQ62388 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
AtmQ62388 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AtmQ62388 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.86□□□□□ -0.35
AtmQ62388 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.86□□□□□ -0.35
AtmQ62388 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.86□□□□□ -0.35
AtmQ62388 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.86□□□□□ -0.35
AtmQ62388 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AtmQ62388 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms