Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm12341-201ENSMUST00000119724 503 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.47□□□□□ -0.09
Smarcd1Q61466 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd1Q61466 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Gm12091-201ENSMUST00000146791 830 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 Gm23984-201ENSMUST00000157139 203 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Gm6180-201ENSMUST00000065243 498 ntBASIC14.46□□□□□ -0.09
Smarcd1Q61466 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd1Q61466 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Smarcd1Q61466 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd1Q61466 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd1Q61466 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd1Q61466 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd1Q61466 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.45□□□□□ -0.1
Smarcd1Q61466 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms