Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.66■□□□□ 0.26
Mre11Q61216 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mre11Q61216 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Mre11Q61216 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.66■□□□□ 0.26
Mre11Q61216 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Gm27357-201ENSMUST00000183754 135 ntBASIC16.66■□□□□ 0.26
Mre11Q61216 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.66■□□□□ 0.26
Mre11Q61216 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.66■□□□□ 0.26
Mre11Q61216 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Mre11Q61216 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.66■□□□□ 0.26
Mre11Q61216 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.66■□□□□ 0.26
Mre11Q61216 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Mre11Q61216 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Mre11Q61216 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mre11Q61216 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Mre11Q61216 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC16.65■□□□□ 0.26
Mre11Q61216 Rubie-203ENSMUST00000227803 2430 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Mre11Q61216 Pck2-205ENSMUST00000226352 2784 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mre11Q61216 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm4535-201ENSMUST00000182274 558 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Gm28033-201ENSMUST00000184224 96 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Gm18669-201ENSMUST00000216049 778 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm10355-201ENSMUST00000097146 517 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.65■□□□□ 0.26
Mre11Q61216 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mre11Q61216 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC16.65■□□□□ 0.26
Mre11Q61216 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.65■□□□□ 0.26
Mre11Q61216 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Mre11Q61216 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Mre11Q61216 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.64■□□□□ 0.25
Mre11Q61216 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Mre11Q61216 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.64■□□□□ 0.25
Mre11Q61216 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.64■□□□□ 0.25
Mre11Q61216 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Gm28196-201ENSMUST00000187719 640 ntBASIC16.64■□□□□ 0.25
Mre11Q61216 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.64■□□□□ 0.25
Mre11Q61216 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms