Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.43□□□□□ -0.26
Col12a1Q60847 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col12a1Q60847 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.42□□□□□ -0.26
Col12a1Q60847 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col12a1Q60847 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.42□□□□□ -0.26
Col12a1Q60847 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Col12a1Q60847 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col12a1Q60847 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.41□□□□□ -0.26
Col12a1Q60847 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.41□□□□□ -0.26
Col12a1Q60847 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.41□□□□□ -0.26
Col12a1Q60847 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.41□□□□□ -0.26
Col12a1Q60847 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.41□□□□□ -0.26
Col12a1Q60847 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.41□□□□□ -0.26
Col12a1Q60847 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col12a1Q60847 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Mir6958-201ENSMUST00000184207 73 ntBASIC13.4□□□□□ -0.26
Col12a1Q60847 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms