Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf20Q5DTM8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.58■□□□□ 0.25
Rnf20Q5DTM8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf20Q5DTM8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf20Q5DTM8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf20Q5DTM8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf20Q5DTM8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Rnf20Q5DTM8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf20Q5DTM8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm13616-201ENSMUST00000120600 222 ntBASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm14767-201ENSMUST00000121559 586 ntBASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm27618-201ENSMUST00000183671 60 ntBASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.56■□□□□ 0.24
Rnf20Q5DTM8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Gm21470-201ENSMUST00000187680 696 ntBASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Gm44344-201ENSMUST00000200287 129 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms