Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.13□□□□□ -0.15
Spire1Q52KF3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Spire1Q52KF3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.12□□□□□ -0.15
Spire1Q52KF3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gm37424-201ENSMUST00000191727 561 ntBASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gm6007-201ENSMUST00000208170 823 ntBASIC14.12□□□□□ -0.15
Spire1Q52KF3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.12□□□□□ -0.15
Spire1Q52KF3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spire1Q52KF3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Spire1Q52KF3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm6152-201ENSMUST00000151704 340 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.11□□□□□ -0.15
Spire1Q52KF3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.11□□□□□ -0.15
Spire1Q52KF3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spire1Q52KF3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.1□□□□□ -0.15
Spire1Q52KF3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spire1Q52KF3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms