Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne3Q4FZC9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne3Q4FZC9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne3Q4FZC9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne3Q4FZC9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gm27618-201ENSMUST00000183671 60 ntBASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syne3Q4FZC9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne3Q4FZC9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.76□□□□□ -0.05
Syne3Q4FZC9 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.76□□□□□ -0.05
Syne3Q4FZC9 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.76□□□□□ -0.05
Syne3Q4FZC9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syne3Q4FZC9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Syne3Q4FZC9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms