Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 B9d1os-201ENSMUST00000137010 674 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm26185-201ENSMUST00000157692 266 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Mir6979-201ENSMUST00000183927 56 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm38317-201ENSMUST00000195564 343 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm4768-201ENSMUST00000206199 686 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm7857-201ENSMUST00000117957 358 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Gm43947-201ENSMUST00000203019 959 ntBASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shank3Q4ACU6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shank3Q4ACU6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gm14028-201ENSMUST00000117434 479 ntBASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gm18584-201ENSMUST00000203098 964 ntBASIC16.89■□□□□ 0.29
Shank3Q4ACU6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank3Q4ACU6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.88■□□□□ 0.29
Shank3Q4ACU6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Gm23270-201ENSMUST00000104055 131 ntBASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Gm11628-201ENSMUST00000117568 171 ntBASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.88■□□□□ 0.29
Shank3Q4ACU6 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms