Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Gm45612-201ENSMUST00000211320 160 ntBASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.74■□□□□ 0.43
Ccdc27Q3V036 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Pcgf5-211ENSMUST00000225920 6443 ntBASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc27Q3V036 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm18737-201ENSMUST00000173594 937 ntBASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.72■□□□□ 0.43
Ccdc27Q3V036 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.72■□□□□ 0.43
Ccdc27Q3V036 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc27Q3V036 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.71■□□□□ 0.43
Ccdc27Q3V036 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms