Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Shisa3Q3UPR0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gm27301-201ENSMUST00000184012 127 ntBASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa3Q3UPR0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shisa3Q3UPR0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shisa3Q3UPR0 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.02□□□□□ -0.48
Shisa3Q3UPR0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shisa3Q3UPR0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm16198-201ENSMUST00000118766 670 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm10275-202ENSMUST00000168697 495 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm2272-201ENSMUST00000194903 582 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms