Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm28659-201ENSMUST00000188013 759 ntBASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm45328-201ENSMUST00000210942 917 ntBASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Gm6443-201ENSMUST00000203599 874 ntBASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccbe1Q3MI99 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Gm15794-201ENSMUST00000120182 631 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Birc2-201ENSMUST00000054878 378 ntBASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccbe1Q3MI99 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms