Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Ush2AQ2QI47 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ush2AQ2QI47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Ighv2-1-201ENSMUST00000170946 353 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm22877-201ENSMUST00000175451 105 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm5732-201ENSMUST00000182596 1007 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm5852-201ENSMUST00000194119 1021 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm5542-201ENSMUST00000195485 1089 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Trav11n-201ENSMUST00000200113 343 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm37737-201ENSMUST00000195013 1638 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm25043-201ENSMUST00000158604 212 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 AC168279.1-201ENSMUST00000214611 382 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm23255-201ENSMUST00000102244 110 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm5616-201ENSMUST00000165252 384 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm8741-201ENSMUST00000174736 384 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm9132-201ENSMUST00000210182 832 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm38049-201ENSMUST00000195698 1372 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Daam2-202ENSMUST00000224595 1926 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm37827-201ENSMUST00000194486 1542 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm44158-201ENSMUST00000203881 505 ntBASIC7.17□□□□□ -1.26
Ush2AQ2QI47 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Ush2AQ2QI47 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm12502-201ENSMUST00000120197 444 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Mir497b-201ENSMUST00000093601 125 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC7.16□□□□□ -1.26
Ush2AQ2QI47 AC153505.1-201ENSMUST00000218819 1071 ntBASIC7.16□□□□□ -1.26
Ush2AQ2QI47 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms