Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm3222-201ENSMUST00000071282 990 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sox4Q06831 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Sox4Q06831 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sox4Q06831 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.67□□□□□ -0.22
Sox4Q06831 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Gm17795-201ENSMUST00000214505 757 ntBASIC13.67□□□□□ -0.22
Sox4Q06831 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.67□□□□□ -0.22
Sox4Q06831 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox4Q06831 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox4Q06831 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sox4Q06831 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sox4Q06831 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.66□□□□□ -0.22
Sox4Q06831 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sox4Q06831 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Gm5425-201ENSMUST00000214125 459 ntBASIC13.66□□□□□ -0.22
Sox4Q06831 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sox4Q06831 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.66□□□□□ -0.22
Sox4Q06831 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox4Q06831 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.66□□□□□ -0.22
Sox4Q06831 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox4Q06831 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sox4Q06831 Gm6912-201ENSMUST00000117218 544 ntBASIC13.65□□□□□ -0.22
Sox4Q06831 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sox4Q06831 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.65□□□□□ -0.22
Sox4Q06831 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms