Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox9Q04887 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox9Q04887 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox9Q04887 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox9Q04887 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox9Q04887 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox9Q04887 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox9Q04887 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sox9Q04887 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox9Q04887 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.31□□□□□ -0.12
Sox9Q04887 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Gm13786-201ENSMUST00000122371 333 ntBASIC14.31□□□□□ -0.12
Sox9Q04887 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.31□□□□□ -0.12
Sox9Q04887 Gm20482-202ENSMUST00000174729 825 ntBASIC14.31□□□□□ -0.12
Sox9Q04887 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Gm37986-201ENSMUST00000193285 383 ntBASIC14.31□□□□□ -0.12
Sox9Q04887 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox9Q04887 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Sox9Q04887 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox9Q04887 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox9Q04887 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Mir686-201ENSMUST00000102174 109 ntBASIC14.3□□□□□ -0.12
Sox9Q04887 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.3□□□□□ -0.12
Sox9Q04887 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox9Q04887 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 Gm25927-201ENSMUST00000175058 117 ntBASIC14.3□□□□□ -0.12
Sox9Q04887 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox9Q04887 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.3□□□□□ -0.12
Sox9Q04887 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.3□□□□□ -0.12
Sox9Q04887 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox9Q04887 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox9Q04887 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox9Q04887 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox9Q04887 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox9Q04887 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox9Q04887 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Gm6621-201ENSMUST00000193251 772 ntBASIC14.29□□□□□ -0.12
Sox9Q04887 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Gm8227-201ENSMUST00000223306 571 ntBASIC14.29□□□□□ -0.12
Sox9Q04887 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sox9Q04887 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox9Q04887 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms