Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch1Q01705 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Notch1Q01705 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch1Q01705 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.04□□□□□ -0.8
Notch1Q01705 Gm14263-201ENSMUST00000117955 746 ntBASIC10.04□□□□□ -0.8
Notch1Q01705 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Notch1Q01705 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.04□□□□□ -0.8
Notch1Q01705 Gm18935-201ENSMUST00000212692 664 ntBASIC10.04□□□□□ -0.8
Notch1Q01705 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.04□□□□□ -0.8
Notch1Q01705 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Notch1Q01705 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.04□□□□□ -0.8
Notch1Q01705 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.04□□□□□ -0.8
Notch1Q01705 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Notch1Q01705 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Notch1Q01705 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm12485-201ENSMUST00000119641 291 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm27341-201ENSMUST00000183570 106 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm37986-201ENSMUST00000193285 383 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Gm6334-201ENSMUST00000207083 228 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Notch1Q01705 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm12134-201ENSMUST00000122109 520 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch1Q01705 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.03□□□□□ -0.8
Notch1Q01705 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Gm37008-201ENSMUST00000195712 319 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.03□□□□□ -0.8
Notch1Q01705 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Notch1Q01705 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.03□□□□□ -0.8
Notch1Q01705 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Notch1Q01705 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch1Q01705 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.02□□□□□ -0.8
Notch1Q01705 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.02□□□□□ -0.8
Notch1Q01705 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Notch1Q01705 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch1Q01705 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms