Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.93□□□□□ -0.5
Smn1P97801 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Smn1P97801 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.92□□□□□ -0.5
Smn1P97801 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smn1P97801 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Smn1P97801 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Smn1P97801 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smn1P97801 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Smn1P97801 Gm17968-201ENSMUST00000194902 784 ntBASIC11.92□□□□□ -0.5
Smn1P97801 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.92□□□□□ -0.5
Smn1P97801 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.92□□□□□ -0.5
Smn1P97801 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Smn1P97801 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smn1P97801 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.91□□□□□ -0.5
Smn1P97801 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.91□□□□□ -0.5
Smn1P97801 Gm12350-201ENSMUST00000121208 462 ntBASIC11.91□□□□□ -0.5
Smn1P97801 Gm12882-201ENSMUST00000121696 517 ntBASIC11.91□□□□□ -0.5
Smn1P97801 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.91□□□□□ -0.5
Smn1P97801 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.91□□□□□ -0.5
Smn1P97801 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.91□□□□□ -0.5
Smn1P97801 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.91□□□□□ -0.5
Smn1P97801 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.91□□□□□ -0.5
Smn1P97801 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smn1P97801 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smn1P97801 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Smn1P97801 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Smn1P97801 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Smn1P97801 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smn1P97801 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.9□□□□□ -0.5
Smn1P97801 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.9□□□□□ -0.5
Smn1P97801 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.9□□□□□ -0.5
Smn1P97801 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.9□□□□□ -0.5
Smn1P97801 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.9□□□□□ -0.5
Smn1P97801 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smn1P97801 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.9□□□□□ -0.5
Smn1P97801 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.9□□□□□ -0.5
Smn1P97801 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smn1P97801 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smn1P97801 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms