Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx3-2P97503 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.16□□□□□ -0.3
Nkx3-2P97503 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm5425-201ENSMUST00000214125 459 ntBASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm6218-201ENSMUST00000219812 628 ntBASIC13.16□□□□□ -0.3
Nkx3-2P97503 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.16□□□□□ -0.3
Nkx3-2P97503 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx3-2P97503 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.15□□□□□ -0.3
Nkx3-2P97503 Gm4804-201ENSMUST00000182234 999 ntBASIC13.15□□□□□ -0.3
Nkx3-2P97503 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.15□□□□□ -0.3
Nkx3-2P97503 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx3-2P97503 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Nkx3-2P97503 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Nkx3-2P97503 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx3-2P97503 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm5745-201ENSMUST00000183748 313 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm10766-202ENSMUST00000194123 606 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm42612-201ENSMUST00000197986 623 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm43170-201ENSMUST00000199827 612 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms