Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Npas1P97459 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Npas1P97459 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.68□□□□□ -0.54
Npas1P97459 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Npas1P97459 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Npas1P97459 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Npas1P97459 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.68□□□□□ -0.54
Npas1P97459 Gm2451-201ENSMUST00000199447 999 ntBASIC11.68□□□□□ -0.54
Npas1P97459 Gm10290-201ENSMUST00000200451 999 ntBASIC11.68□□□□□ -0.54
Npas1P97459 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.68□□□□□ -0.54
Npas1P97459 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Npas1P97459 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Npas1P97459 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Npas1P97459 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.67□□□□□ -0.54
Npas1P97459 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Gm25925-201ENSMUST00000158314 306 ntBASIC11.67□□□□□ -0.54
Npas1P97459 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Gm28033-201ENSMUST00000184224 96 ntBASIC11.67□□□□□ -0.54
Npas1P97459 Ank2-226ENSMUST00000189368 339 ntBASIC11.67□□□□□ -0.54
Npas1P97459 Gm34391-201ENSMUST00000203706 907 ntBASIC11.67□□□□□ -0.54
Npas1P97459 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.67□□□□□ -0.54
Npas1P97459 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Npas1P97459 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.67□□□□□ -0.54
Npas1P97459 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Npas1P97459 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Npas1P97459 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npas1P97459 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.66□□□□□ -0.54
Npas1P97459 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms