Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim43cP86449 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.11■□□□□ 0.01
Trim43cP86449 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim43cP86449 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trim43cP86449 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim43cP86449 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim43cP86449 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim43cP86449 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim43cP86449 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.1■□□□□ 0.01
Trim43cP86449 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim43cP86449 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim43cP86449 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim43cP86449 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim43cP86449 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.1■□□□□ 0.01
Trim43cP86449 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43cP86449 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trim43cP86449 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim43cP86449 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim43cP86449 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim43cP86449 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim43cP86449 Gm15321-201ENSMUST00000121290 288 ntBASIC15.09■□□□□ 0.01
Trim43cP86449 Gm14719-201ENSMUST00000121891 340 ntBASIC15.09■□□□□ 0.01
Trim43cP86449 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim43cP86449 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trim43cP86449 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim43cP86449 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Mir7023-201ENSMUST00000185093 64 ntBASIC15.09■□□□□ 0.01
Trim43cP86449 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.09■□□□□ 0.01
Trim43cP86449 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim43cP86449 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim43cP86449 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43cP86449 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim43cP86449 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43cP86449 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.09■□□□□ 0.01
Trim43cP86449 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim43cP86449 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.08■□□□□ 0.01
Trim43cP86449 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43cP86449 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43cP86449 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43cP86449 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43cP86449 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.08■□□□□ 0
Trim43cP86449 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.08■□□□□ 0
Trim43cP86449 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.08■□□□□ 0
Trim43cP86449 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.08■□□□□ 0
Trim43cP86449 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43cP86449 Gm20949-201ENSMUST00000206478 952 ntBASIC15.08■□□□□ 0
Trim43cP86449 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms