Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SgcaP82350 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Gm7222-201ENSMUST00000117512 906 ntBASIC11.67□□□□□ -0.54
SgcaP82350 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.67□□□□□ -0.54
SgcaP82350 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.67□□□□□ -0.54
SgcaP82350 Gm7977-201ENSMUST00000193787 748 ntBASIC11.67□□□□□ -0.54
SgcaP82350 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.67□□□□□ -0.54
SgcaP82350 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcaP82350 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SgcaP82350 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.67□□□□□ -0.54
SgcaP82350 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcaP82350 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SgcaP82350 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.66□□□□□ -0.54
SgcaP82350 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SgcaP82350 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SgcaP82350 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.66□□□□□ -0.54
SgcaP82350 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.66□□□□□ -0.54
SgcaP82350 Gm45167-201ENSMUST00000208007 322 ntBASIC11.66□□□□□ -0.54
SgcaP82350 Gm18669-201ENSMUST00000216049 778 ntBASIC11.66□□□□□ -0.54
SgcaP82350 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.66□□□□□ -0.54
SgcaP82350 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.66□□□□□ -0.54
SgcaP82350 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
SgcaP82350 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SgcaP82350 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
SgcaP82350 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SgcaP82350 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.65□□□□□ -0.54
SgcaP82350 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SgcaP82350 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SgcaP82350 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.65□□□□□ -0.54
SgcaP82350 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms