Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SgcbP82349 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.42□□□□□ -0.42
SgcbP82349 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.42□□□□□ -0.42
SgcbP82349 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcbP82349 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcbP82349 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SgcbP82349 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.41□□□□□ -0.42
SgcbP82349 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.41□□□□□ -0.42
SgcbP82349 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.41□□□□□ -0.42
SgcbP82349 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SgcbP82349 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcbP82349 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.41□□□□□ -0.42
SgcbP82349 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Gm5866-201ENSMUST00000177881 973 ntBASIC12.41□□□□□ -0.42
SgcbP82349 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SgcbP82349 Gm27437-201ENSMUST00000183429 107 ntBASIC12.41□□□□□ -0.42
SgcbP82349 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SgcbP82349 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcbP82349 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Gm5425-201ENSMUST00000214125 459 ntBASIC12.41□□□□□ -0.42
SgcbP82349 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.41□□□□□ -0.42
SgcbP82349 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.41□□□□□ -0.42
SgcbP82349 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SgcbP82349 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcbP82349 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Gm7063-201ENSMUST00000186840 981 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Gm29667-201ENSMUST00000190817 490 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.4□□□□□ -0.42
SgcbP82349 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Gm44855-201ENSMUST00000205725 362 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.4□□□□□ -0.42
SgcbP82349 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.4□□□□□ -0.42
SgcbP82349 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.4□□□□□ -0.42
SgcbP82349 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SgcbP82349 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.4□□□□□ -0.42
SgcbP82349 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SgcbP82349 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcbP82349 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms