Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm12613-201ENSMUST00000180323 382 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC22.31■■□□□ 1.16
Cux2P70298 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC22.31■■□□□ 1.16
Cux2P70298 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 n-R5s77-201ENSMUST00000083757 119 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Cux2P70298 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cux2P70298 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cux2P70298 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Cux2P70298 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC22.31■■□□□ 1.16
Cux2P70298 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Gm8584-201ENSMUST00000171982 758 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Gm5950-201ENSMUST00000213337 772 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Gm9004-201ENSMUST00000218739 1222 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC22.31■■□□□ 1.16
Cux2P70298 AC069562.3-201ENSMUST00000225387 587 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
Cux2P70298 Gm15897-201ENSMUST00000117770 1486 ntBASIC22.31■■□□□ 1.16
Cux2P70298 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cux2P70298 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC22.3■■□□□ 1.16
Cux2P70298 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC22.3■■□□□ 1.16
Cux2P70298 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.3■■□□□ 1.16
Cux2P70298 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC22.3■■□□□ 1.16
Cux2P70298 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC22.3■■□□□ 1.16
Cux2P70298 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC22.3■■□□□ 1.16
Cux2P70298 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cux2P70298 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC22.3■■□□□ 1.16
Cux2P70298 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cux2P70298 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
Cux2P70298 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC22.29■■□□□ 1.16
Cux2P70298 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Cux2P70298 Gm19963-201ENSMUST00000208413 1255 ntBASIC22.29■■□□□ 1.16
Cux2P70298 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cux2P70298 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Cux2P70298 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Gm19221-201ENSMUST00000221827 1477 ntBASIC22.28■■□□□ 1.16
Cux2P70298 Gm4366-201ENSMUST00000201488 1342 ntBASIC22.28■■□□□ 1.16
Cux2P70298 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cux2P70298 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Gm44262-201ENSMUST00000204969 372 ntBASIC22.28■■□□□ 1.16
Cux2P70298 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cux2P70298 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cux2P70298 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cux2P70298 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cux2P70298 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC22.27■■□□□ 1.16
Cux2P70298 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Snord83b-201ENSMUST00000104546 94 ntBASIC22.27■■□□□ 1.16
Cux2P70298 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Gm45118-201ENSMUST00000208928 825 ntBASIC22.27■■□□□ 1.16
Cux2P70298 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cux2P70298 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms