Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six5P70178 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Six5P70178 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Six5P70178 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Six5P70178 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Six5P70178 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Six5P70178 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.04□□□□□ -0.32
Six5P70178 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.04□□□□□ -0.32
Six5P70178 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.04□□□□□ -0.32
Six5P70178 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.04□□□□□ -0.32
Six5P70178 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.04□□□□□ -0.32
Six5P70178 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.04□□□□□ -0.32
Six5P70178 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Six5P70178 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.04□□□□□ -0.32
Six5P70178 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.04□□□□□ -0.32
Six5P70178 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Six5P70178 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.03□□□□□ -0.32
Six5P70178 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Six5P70178 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Six5P70178 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.03□□□□□ -0.32
Six5P70178 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.03□□□□□ -0.32
Six5P70178 Gm10766-202ENSMUST00000194123 606 ntBASIC13.03□□□□□ -0.32
Six5P70178 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.03□□□□□ -0.32
Six5P70178 Gm44719-201ENSMUST00000206404 149 ntBASIC13.03□□□□□ -0.32
Six5P70178 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.03□□□□□ -0.32
Six5P70178 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Six5P70178 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Six5P70178 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.03□□□□□ -0.32
Six5P70178 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six5P70178 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.02□□□□□ -0.32
Six5P70178 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Six5P70178 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six5P70178 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six5P70178 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Six5P70178 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.02□□□□□ -0.32
Six5P70178 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.02□□□□□ -0.33
Six5P70178 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Six5P70178 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.02□□□□□ -0.33
Six5P70178 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.02□□□□□ -0.33
Six5P70178 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Six5P70178 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.02□□□□□ -0.33
Six5P70178 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.02□□□□□ -0.33
Six5P70178 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Six5P70178 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms