Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm6P62313 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Lsm6P62313 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm6P62313 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lsm6P62313 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.22□□□□□ -0.45
Lsm6P62313 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.22□□□□□ -0.45
Lsm6P62313 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm6P62313 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.22□□□□□ -0.45
Lsm6P62313 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm6P62313 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm6P62313 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm6P62313 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.21□□□□□ -0.45
Lsm6P62313 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 Gm15460-201ENSMUST00000118147 391 ntBASIC12.21□□□□□ -0.45
Lsm6P62313 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.21□□□□□ -0.45
Lsm6P62313 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.21□□□□□ -0.45
Lsm6P62313 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm6P62313 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lsm6P62313 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm6P62313 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Lsm6P62313 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.21□□□□□ -0.46
Lsm6P62313 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Lsm6P62313 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.21□□□□□ -0.46
Lsm6P62313 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Lsm6P62313 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm6P62313 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm6P62313 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm6P62313 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm6P62313 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Lsm6P62313 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.2□□□□□ -0.46
Lsm6P62313 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm6P62313 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Gm22175-201ENSMUST00000175007 78 ntBASIC12.2□□□□□ -0.46
Lsm6P62313 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.2□□□□□ -0.46
Lsm6P62313 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.2□□□□□ -0.46
Lsm6P62313 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Lsm6P62313 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm6P62313 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms