Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Sf3b6P59708 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sf3b6P59708 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.35□□□□□ -0.43
Sf3b6P59708 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.35□□□□□ -0.43
Sf3b6P59708 Gm15483-201ENSMUST00000120338 456 ntBASIC12.35□□□□□ -0.43
Sf3b6P59708 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Gm44608-201ENSMUST00000206827 855 ntBASIC12.35□□□□□ -0.43
Sf3b6P59708 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sf3b6P59708 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sf3b6P59708 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.34□□□□□ -0.43
Sf3b6P59708 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.34□□□□□ -0.43
Sf3b6P59708 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.34□□□□□ -0.43
Sf3b6P59708 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.34□□□□□ -0.43
Sf3b6P59708 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.34□□□□□ -0.43
Sf3b6P59708 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.34□□□□□ -0.43
Sf3b6P59708 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sf3b6P59708 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sf3b6P59708 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.33□□□□□ -0.44
Sf3b6P59708 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms