Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rab4aP56371 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.96□□□□□ -0.65
Rab4aP56371 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.96□□□□□ -0.65
Rab4aP56371 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Rab4aP56371 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.96□□□□□ -0.65
Rab4aP56371 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC10.96□□□□□ -0.65
Rab4aP56371 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rab4aP56371 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rab4aP56371 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.96□□□□□ -0.65
Rab4aP56371 Gm10812-201ENSMUST00000099864 546 ntBASIC10.96□□□□□ -0.65
Rab4aP56371 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rab4aP56371 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.96□□□□□ -0.66
Rab4aP56371 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.96□□□□□ -0.66
Rab4aP56371 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rab4aP56371 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rab4aP56371 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rab4aP56371 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rab4aP56371 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.95□□□□□ -0.66
Rab4aP56371 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.95□□□□□ -0.66
Rab4aP56371 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rab4aP56371 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rab4aP56371 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rab4aP56371 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Grk6-207ENSMUST00000225925 2769 ntBASIC10.95□□□□□ -0.66
Rab4aP56371 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.95□□□□□ -0.66
Rab4aP56371 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rab4aP56371 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.94□□□□□ -0.66
Rab4aP56371 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.94□□□□□ -0.66
Rab4aP56371 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rab4aP56371 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rab4aP56371 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.94□□□□□ -0.66
Rab4aP56371 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.94□□□□□ -0.66
Rab4aP56371 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.94□□□□□ -0.66
Rab4aP56371 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rab4aP56371 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.94□□□□□ -0.66
Rab4aP56371 Gm22697-201ENSMUST00000175194 63 ntBASIC10.94□□□□□ -0.66
Rab4aP56371 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.94□□□□□ -0.66
Rab4aP56371 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms