Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Msh6P54276 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.51■□□□□ 0.39
Msh6P54276 Gm19309-201ENSMUST00000218295 205 ntBASIC17.51■□□□□ 0.39
Msh6P54276 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.51■□□□□ 0.39
Msh6P54276 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.51■□□□□ 0.39
Msh6P54276 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.51■□□□□ 0.39
Msh6P54276 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh6P54276 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Msh6P54276 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Msh6P54276 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Msh6P54276 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.5■□□□□ 0.39
Msh6P54276 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.5■□□□□ 0.39
Msh6P54276 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.5■□□□□ 0.39
Msh6P54276 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.5■□□□□ 0.39
Msh6P54276 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.5■□□□□ 0.39
Msh6P54276 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.5■□□□□ 0.39
Msh6P54276 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Mir8109-201ENSMUST00000184375 117 ntBASIC17.5■□□□□ 0.39
Msh6P54276 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Msh6P54276 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.5■□□□□ 0.39
Msh6P54276 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.5■□□□□ 0.39
Msh6P54276 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh6P54276 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
Msh6P54276 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Msh6P54276 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Msh6P54276 Gm14723-201ENSMUST00000118686 215 ntBASIC17.49■□□□□ 0.39
Msh6P54276 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.49■□□□□ 0.39
Msh6P54276 Gm8810-201ENSMUST00000172895 754 ntBASIC17.49■□□□□ 0.39
Msh6P54276 Gm27331-201ENSMUST00000183705 60 ntBASIC17.49■□□□□ 0.39
Msh6P54276 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.49■□□□□ 0.39
Msh6P54276 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.49■□□□□ 0.39
Msh6P54276 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.49■□□□□ 0.39
Msh6P54276 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh6P54276 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Msh6P54276 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Msh6P54276 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Msh6P54276 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.48■□□□□ 0.39
Msh6P54276 Sybu-209ENSMUST00000228639 4113 ntBASIC17.48■□□□□ 0.39
Msh6P54276 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Msh6P54276 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Gm10156-201ENSMUST00000122364 462 ntBASIC17.48■□□□□ 0.39
Msh6P54276 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Msh6P54276 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh6P54276 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.48■□□□□ 0.39
Msh6P54276 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms