Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox3P53784 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Sox3P53784 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sox3P53784 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox3P53784 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.34□□□□□ -0.27
Sox3P53784 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Sox3P53784 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Gm28760-201ENSMUST00000185995 736 ntBASIC13.34□□□□□ -0.27
Sox3P53784 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.34□□□□□ -0.27
Sox3P53784 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.34□□□□□ -0.27
Sox3P53784 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sox3P53784 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox3P53784 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox3P53784 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox3P53784 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
Sox3P53784 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Gm16476-201ENSMUST00000221544 139 ntBASIC13.33□□□□□ -0.28
Sox3P53784 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sox3P53784 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.33□□□□□ -0.28
Sox3P53784 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.33□□□□□ -0.28
Sox3P53784 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox3P53784 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Sox3P53784 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox3P53784 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.32□□□□□ -0.28
Sox3P53784 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Sox3P53784 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Mir3102-201ENSMUST00000175555 104 ntBASIC13.32□□□□□ -0.28
Sox3P53784 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.32□□□□□ -0.28
Sox3P53784 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox3P53784 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.32□□□□□ -0.28
Sox3P53784 Gm9797-201ENSMUST00000052902 613 ntBASIC13.32□□□□□ -0.28
Sox3P53784 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms