Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.14□□□□□ -0.15
Sox1P53783 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.14□□□□□ -0.15
Sox1P53783 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Sox1P53783 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sox1P53783 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Gm24420-201ENSMUST00000176676 59 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox1P53783 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Gm43058-201ENSMUST00000197645 625 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Gm18027-201ENSMUST00000218947 619 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox1P53783 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.13□□□□□ -0.15
Sox1P53783 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox1P53783 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox1P53783 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sox1P53783 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox1P53783 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox1P53783 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox1P53783 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox1P53783 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox1P53783 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.12□□□□□ -0.15
Sox1P53783 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Gm11964-201ENSMUST00000120982 444 ntBASIC14.12□□□□□ -0.15
Sox1P53783 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox1P53783 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.12□□□□□ -0.15
Sox1P53783 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox1P53783 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Sox1P53783 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox1P53783 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.12□□□□□ -0.15
Sox1P53783 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.12□□□□□ -0.15
Sox1P53783 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox1P53783 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox1P53783 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox1P53783 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms