Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.52■□□□□ 0.24
Ercc3P49135 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ercc3P49135 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Gm15393-201ENSMUST00000120499 219 ntBASIC16.52■□□□□ 0.24
Ercc3P49135 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.52■□□□□ 0.24
Ercc3P49135 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ercc3P49135 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.52■□□□□ 0.24
Ercc3P49135 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Ercc3P49135 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc3P49135 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.52■□□□□ 0.23
Ercc3P49135 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ercc3P49135 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc3P49135 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ercc3P49135 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.51■□□□□ 0.23
Ercc3P49135 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Mir6977-201ENSMUST00000184960 64 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 Gm44608-201ENSMUST00000206827 855 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.51■□□□□ 0.23
Ercc3P49135 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 Gm20445-201ENSMUST00000061905 565 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 Mir497b-201ENSMUST00000093601 125 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ercc3P49135 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ercc3P49135 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ercc3P49135 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Syt7-205ENSMUST00000224135 1557 ntBASIC16.51■□□□□ 0.23
Ercc3P49135 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ercc3P49135 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Ercc3P49135 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.5■□□□□ 0.23
Ercc3P49135 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.5■□□□□ 0.23
Ercc3P49135 Gm27437-201ENSMUST00000183429 107 ntBASIC16.5■□□□□ 0.23
Ercc3P49135 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.5■□□□□ 0.23
Ercc3P49135 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ercc3P49135 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ercc3P49135 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ercc3P49135 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ercc3P49135 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ercc3P49135 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ercc3P49135 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.49■□□□□ 0.23
Ercc3P49135 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ercc3P49135 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ercc3P49135 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ercc3P49135 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ercc3P49135 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ercc3P49135 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms