Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.12□□□□□ -0.15
Vps4bP46467 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps4bP46467 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.12□□□□□ -0.15
Vps4bP46467 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.12□□□□□ -0.15
Vps4bP46467 Gm13616-201ENSMUST00000120600 222 ntBASIC14.12□□□□□ -0.15
Vps4bP46467 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Gm2445-201ENSMUST00000182798 989 ntBASIC14.12□□□□□ -0.15
Vps4bP46467 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps4bP46467 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Vps4bP46467 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps4bP46467 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.12□□□□□ -0.15
Vps4bP46467 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.12□□□□□ -0.15
Vps4bP46467 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4bP46467 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Gm13365-201ENSMUST00000121188 973 ntBASIC14.11□□□□□ -0.15
Vps4bP46467 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.11□□□□□ -0.15
Vps4bP46467 Gm27631-201ENSMUST00000184163 466 ntBASIC14.11□□□□□ -0.15
Vps4bP46467 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.11□□□□□ -0.15
Vps4bP46467 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps4bP46467 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4bP46467 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps4bP46467 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps4bP46467 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps4bP46467 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps4bP46467 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vps4bP46467 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Gm13015-201ENSMUST00000118674 204 ntBASIC14.1□□□□□ -0.15
Vps4bP46467 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.1□□□□□ -0.15
Vps4bP46467 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Vps4bP46467 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps4bP46467 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.1□□□□□ -0.15
Vps4bP46467 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps4bP46467 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vps4bP46467 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps4bP46467 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms