Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.44■□□□□ 0.86
Chd1P40201 AC132901.1-201ENSMUST00000224345 508 ntBASIC20.44■□□□□ 0.86
Chd1P40201 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Chd1P40201 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1P40201 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Gm13996-201ENSMUST00000118456 430 ntBASIC20.43■□□□□ 0.86
Chd1P40201 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Gm5369-201ENSMUST00000217499 588 ntBASIC20.43■□□□□ 0.86
Chd1P40201 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chd1P40201 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chd1P40201 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.43■□□□□ 0.86
Chd1P40201 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1P40201 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chd1P40201 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC20.42■□□□□ 0.86
Chd1P40201 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chd1P40201 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Chd1P40201 AC135469.1-201ENSMUST00000225984 772 ntBASIC20.42■□□□□ 0.86
Chd1P40201 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC20.42■□□□□ 0.86
Chd1P40201 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1P40201 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd1P40201 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC20.41■□□□□ 0.86
Chd1P40201 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC20.41■□□□□ 0.86
Chd1P40201 Gm19353-201ENSMUST00000184561 445 ntBASIC20.41■□□□□ 0.86
Chd1P40201 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Gm10179-201ENSMUST00000086233 688 ntBASIC20.41■□□□□ 0.86
Chd1P40201 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd1P40201 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC20.41■□□□□ 0.86
Chd1P40201 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC20.41■□□□□ 0.86
Chd1P40201 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC20.41■□□□□ 0.86
Chd1P40201 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Gm14665-201ENSMUST00000122294 557 ntBASIC20.41■□□□□ 0.86
Chd1P40201 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Chd1P40201 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC20.41■□□□□ 0.86
Chd1P40201 Gm4864-201ENSMUST00000219894 1461 ntBASIC20.41■□□□□ 0.86
Chd1P40201 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.41■□□□□ 0.86
Chd1P40201 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1P40201 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Gm13611-201ENSMUST00000118269 318 ntBASIC20.4■□□□□ 0.86
Chd1P40201 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Rprl1-202ENSMUST00000198476 238 ntBASIC20.4■□□□□ 0.86
Chd1P40201 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC20.4■□□□□ 0.86
Chd1P40201 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.4■□□□□ 0.86
Chd1P40201 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd1P40201 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC20.39■□□□□ 0.86
Chd1P40201 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chd1P40201 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC20.39■□□□□ 0.86
Chd1P40201 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd1P40201 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC20.39■□□□□ 0.86
Chd1P40201 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chd1P40201 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC20.39■□□□□ 0.86
Chd1P40201 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms