Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.19■□□□□ 0.02
Sox5P35710 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.19■□□□□ 0.02
Sox5P35710 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sox5P35710 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.19■□□□□ 0.02
Sox5P35710 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox5P35710 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox5P35710 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Sox5P35710 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox5P35710 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.18■□□□□ 0.02
Sox5P35710 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Gm27631-201ENSMUST00000184163 466 ntBASIC15.18■□□□□ 0.02
Sox5P35710 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Gm45453-201ENSMUST00000211758 853 ntBASIC15.18■□□□□ 0.02
Sox5P35710 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Gm18041-201ENSMUST00000218210 618 ntBASIC15.18■□□□□ 0.02
Sox5P35710 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.18■□□□□ 0.02
Sox5P35710 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox5P35710 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Sox5P35710 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox5P35710 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.18■□□□□ 0.02
Sox5P35710 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.17■□□□□ 0.02
Sox5P35710 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sox5P35710 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Sox5P35710 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Sox5P35710 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sox5P35710 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.17■□□□□ 0.02
Sox5P35710 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.17■□□□□ 0.02
Sox5P35710 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Gm29741-201ENSMUST00000192667 421 ntBASIC15.17■□□□□ 0.02
Sox5P35710 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.17■□□□□ 0.02
Sox5P35710 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.17■□□□□ 0.02
Sox5P35710 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Sox5P35710 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.17■□□□□ 0.02
Sox5P35710 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox5P35710 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sox5P35710 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms