Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.05□□□□□ -0.32
RetP35546 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
RetP35546 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.05□□□□□ -0.32
RetP35546 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Gm12091-201ENSMUST00000146791 830 ntBASIC13.05□□□□□ -0.32
RetP35546 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.05□□□□□ -0.32
RetP35546 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.05□□□□□ -0.32
RetP35546 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.05□□□□□ -0.32
RetP35546 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RetP35546 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RetP35546 Gm20445-201ENSMUST00000061905 565 ntBASIC13.05□□□□□ -0.32
RetP35546 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
RetP35546 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RetP35546 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RetP35546 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RetP35546 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.04□□□□□ -0.32
RetP35546 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RetP35546 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RetP35546 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.04□□□□□ -0.32
RetP35546 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RetP35546 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.04□□□□□ -0.32
RetP35546 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.04□□□□□ -0.32
RetP35546 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RetP35546 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.04□□□□□ -0.32
RetP35546 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RetP35546 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.04□□□□□ -0.32
RetP35546 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.03□□□□□ -0.32
RetP35546 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RetP35546 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RetP35546 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RetP35546 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RetP35546 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RetP35546 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.03□□□□□ -0.32
RetP35546 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.03□□□□□ -0.32
RetP35546 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.03□□□□□ -0.32
RetP35546 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.03□□□□□ -0.32
RetP35546 Mir1897-201ENSMUST00000122581 272 ntBASIC13.03□□□□□ -0.32
RetP35546 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.03□□□□□ -0.32
RetP35546 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.03□□□□□ -0.32
RetP35546 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RetP35546 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.03□□□□□ -0.32
RetP35546 Gm18062-201ENSMUST00000208020 547 ntBASIC13.03□□□□□ -0.32
RetP35546 Gm18055-201ENSMUST00000208254 547 ntBASIC13.03□□□□□ -0.32
RetP35546 Gm46209-201ENSMUST00000217912 553 ntBASIC13.03□□□□□ -0.32
RetP35546 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.03□□□□□ -0.32
RetP35546 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.03□□□□□ -0.32
RetP35546 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms