Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Slc6a1P31648 Mir8117-201ENSMUST00000184773 107 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 Gm5264-201ENSMUST00000190584 848 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a1P31648 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc6a1P31648 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Gm27628-201ENSMUST00000184911 107 ntBASIC11.97□□□□□ -0.49
Slc6a1P31648 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.97□□□□□ -0.49
Slc6a1P31648 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.97□□□□□ -0.49
Slc6a1P31648 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.97□□□□□ -0.49
Slc6a1P31648 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a1P31648 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Slc6a1P31648 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.96□□□□□ -0.49
Slc6a1P31648 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.96□□□□□ -0.49
Slc6a1P31648 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.96□□□□□ -0.49
Slc6a1P31648 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.96□□□□□ -0.49
Slc6a1P31648 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.96□□□□□ -0.49
Slc6a1P31648 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc6a1P31648 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc6a1P31648 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc6a1P31648 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc6a1P31648 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Slc6a1P31648 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Slc6a1P31648 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Slc6a1P31648 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Slc6a1P31648 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms