Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm29518-201ENSMUST00000190858 372 ntBASIC12.83□□□□□ -0.36
Nedd8P29595 Gm9682-201ENSMUST00000197505 556 ntBASIC12.83□□□□□ -0.36
Nedd8P29595 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Pck2-205ENSMUST00000226352 2784 ntBASIC12.83□□□□□ -0.36
Nedd8P29595 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nedd8P29595 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Paupar-201ENSMUST00000194826 3482 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Nedd8P29595 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nedd8P29595 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.82□□□□□ -0.36
Nedd8P29595 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nedd8P29595 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nedd8P29595 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nedd8P29595 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nedd8P29595 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.82□□□□□ -0.36
Nedd8P29595 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nedd8P29595 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nedd8P29595 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Nedd8P29595 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nedd8P29595 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.81□□□□□ -0.36
Nedd8P29595 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Gm9182-201ENSMUST00000217829 639 ntBASIC12.81□□□□□ -0.36
Nedd8P29595 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nedd8P29595 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.81□□□□□ -0.36
Nedd8P29595 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nedd8P29595 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms