Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.11■□□□□ 0.17
Pde6aP27664 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pde6aP27664 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Pde6aP27664 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pde6aP27664 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pde6aP27664 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.11■□□□□ 0.17
Pde6aP27664 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.11■□□□□ 0.17
Pde6aP27664 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.11■□□□□ 0.17
Pde6aP27664 Gm28760-201ENSMUST00000185995 736 ntBASIC16.11■□□□□ 0.17
Pde6aP27664 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.11■□□□□ 0.17
Pde6aP27664 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.11■□□□□ 0.17
Pde6aP27664 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pde6aP27664 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pde6aP27664 Syt7-205ENSMUST00000224135 1557 ntBASIC16.11■□□□□ 0.17
Pde6aP27664 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6aP27664 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.11■□□□□ 0.17
Pde6aP27664 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pde6aP27664 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pde6aP27664 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pde6aP27664 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Pde6aP27664 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.1■□□□□ 0.17
Pde6aP27664 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6aP27664 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.1■□□□□ 0.17
Pde6aP27664 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.1■□□□□ 0.17
Pde6aP27664 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6aP27664 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6aP27664 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6aP27664 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.1■□□□□ 0.17
Pde6aP27664 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pde6aP27664 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.09■□□□□ 0.17
Pde6aP27664 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Pde6aP27664 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.09■□□□□ 0.17
Pde6aP27664 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.09■□□□□ 0.17
Pde6aP27664 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.09■□□□□ 0.17
Pde6aP27664 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.09■□□□□ 0.17
Pde6aP27664 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.09■□□□□ 0.17
Pde6aP27664 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.09■□□□□ 0.17
Pde6aP27664 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6aP27664 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pde6aP27664 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pde6aP27664 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pde6aP27664 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pde6aP27664 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.08■□□□□ 0.17
Pde6aP27664 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms