Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.87□□□□□ -0.35
Cd40lgP27548 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.87□□□□□ -0.35
Cd40lgP27548 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Gm15653-201ENSMUST00000119247 907 ntBASIC12.86□□□□□ -0.35
Cd40lgP27548 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Gm27618-201ENSMUST00000183671 60 ntBASIC12.86□□□□□ -0.35
Cd40lgP27548 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.86□□□□□ -0.35
Cd40lgP27548 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd40lgP27548 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Cd40lgP27548 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm10275-202ENSMUST00000168697 495 ntBASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm27631-201ENSMUST00000184163 466 ntBASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm44344-201ENSMUST00000200287 129 ntBASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm45453-201ENSMUST00000211758 853 ntBASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.85□□□□□ -0.35
Cd40lgP27548 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.85□□□□□ -0.35
Cd40lgP27548 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Gm10275-201ENSMUST00000092620 635 ntBASIC12.85□□□□□ -0.35
Cd40lgP27548 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cd40lgP27548 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40lgP27548 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms