Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.49□□□□□ -0.41
Cd48P18181 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.49□□□□□ -0.41
Cd48P18181 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.49□□□□□ -0.41
Cd48P18181 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cd48P18181 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cd48P18181 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cd48P18181 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.49□□□□□ -0.41
Cd48P18181 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cd48P18181 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cd48P18181 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cd48P18181 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cd48P18181 Gm15957-201ENSMUST00000118893 974 ntBASIC12.48□□□□□ -0.41
Cd48P18181 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.48□□□□□ -0.41
Cd48P18181 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Mir1895-201ENSMUST00000122615 79 ntBASIC12.48□□□□□ -0.41
Cd48P18181 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.48□□□□□ -0.41
Cd48P18181 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.48□□□□□ -0.41
Cd48P18181 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.48□□□□□ -0.41
Cd48P18181 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.48□□□□□ -0.41
Cd48P18181 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.48□□□□□ -0.41
Cd48P18181 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.48□□□□□ -0.41
Cd48P18181 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cd48P18181 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.48□□□□□ -0.41
Cd48P18181 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd48P18181 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Cd48P18181 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Gm14494-201ENSMUST00000118786 435 ntBASIC12.47□□□□□ -0.41
Cd48P18181 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.47□□□□□ -0.41
Cd48P18181 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.47□□□□□ -0.41
Cd48P18181 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.47□□□□□ -0.41
Cd48P18181 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cd48P18181 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd48P18181 Grk6-205ENSMUST00000224653 2976 ntBASIC12.47□□□□□ -0.41
Cd48P18181 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms