Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cntn1P12960 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cntn1P12960 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.35□□□□□ -0.27
Cntn1P12960 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cntn1P12960 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.35□□□□□ -0.27
Cntn1P12960 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.35□□□□□ -0.27
Cntn1P12960 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cntn1P12960 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.35□□□□□ -0.27
Cntn1P12960 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Cntn1P12960 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cntn1P12960 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cntn1P12960 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cntn1P12960 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.34□□□□□ -0.27
Cntn1P12960 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.34□□□□□ -0.27
Cntn1P12960 Gm9794-201ENSMUST00000202370 423 ntBASIC13.34□□□□□ -0.27
Cntn1P12960 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.34□□□□□ -0.27
Cntn1P12960 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.34□□□□□ -0.27
Cntn1P12960 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cntn1P12960 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cntn1P12960 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cntn1P12960 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cntn1P12960 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cntn1P12960 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cntn1P12960 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cntn1P12960 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.33□□□□□ -0.27
Cntn1P12960 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cntn1P12960 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cntn1P12960 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cntn1P12960 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cntn1P12960 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.33□□□□□ -0.28
Cntn1P12960 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.33□□□□□ -0.28
Cntn1P12960 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm6745-201ENSMUST00000199216 526 ntBASIC13.33□□□□□ -0.28
Cntn1P12960 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.33□□□□□ -0.28
Cntn1P12960 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm5425-201ENSMUST00000214125 459 ntBASIC13.33□□□□□ -0.28
Cntn1P12960 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm6180-201ENSMUST00000065243 498 ntBASIC13.33□□□□□ -0.28
Cntn1P12960 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cntn1P12960 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cntn1P12960 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cntn1P12960 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cntn1P12960 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.33□□□□□ -0.28
Cntn1P12960 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cntn1P12960 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.32□□□□□ -0.28
Cntn1P12960 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cntn1P12960 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cntn1P12960 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 198.3 ms