Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccl3P10855 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl3P10855 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccl3P10855 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.23□□□□□ -0.45
Ccl3P10855 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.23□□□□□ -0.45
Ccl3P10855 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm10156-201ENSMUST00000122364 462 ntBASIC12.23□□□□□ -0.45
Ccl3P10855 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl3P10855 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm6013-201ENSMUST00000212264 699 ntBASIC12.23□□□□□ -0.45
Ccl3P10855 Gm45880-201ENSMUST00000213041 853 ntBASIC12.23□□□□□ -0.45
Ccl3P10855 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.23□□□□□ -0.45
Ccl3P10855 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl3P10855 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ccl3P10855 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccl3P10855 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl3P10855 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.22□□□□□ -0.45
Ccl3P10855 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccl3P10855 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccl3P10855 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.22□□□□□ -0.45
Ccl3P10855 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.22□□□□□ -0.45
Ccl3P10855 Gm9257-201ENSMUST00000221254 232 ntBASIC12.22□□□□□ -0.45
Ccl3P10855 Itm2b-204ENSMUST00000228637 783 ntBASIC12.22□□□□□ -0.45
Ccl3P10855 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccl3P10855 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccl3P10855 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
Ccl3P10855 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl3P10855 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl3P10855 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccl3P10855 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccl3P10855 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccl3P10855 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.45
Ccl3P10855 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccl3P10855 Gm12203-201ENSMUST00000118235 598 ntBASIC12.21□□□□□ -0.45
Ccl3P10855 Gm5687-201ENSMUST00000118252 640 ntBASIC12.21□□□□□ -0.45
Ccl3P10855 Gm12209-201ENSMUST00000120089 596 ntBASIC12.21□□□□□ -0.45
Ccl3P10855 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.21□□□□□ -0.45
Ccl3P10855 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.21□□□□□ -0.45
Ccl3P10855 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms