Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC20.61■□□□□ 0.89
NclP09405 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
NclP09405 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NclP09405 Gm11524-201ENSMUST00000119349 807 ntBASIC20.61■□□□□ 0.89
NclP09405 Gm27772-201ENSMUST00000184900 187 ntBASIC20.61■□□□□ 0.89
NclP09405 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.61■□□□□ 0.89
NclP09405 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NclP09405 CT030704.2-201ENSMUST00000228887 494 ntBASIC20.61■□□□□ 0.89
NclP09405 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NclP09405 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NclP09405 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NclP09405 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NclP09405 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.61■□□□□ 0.89
NclP09405 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NclP09405 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NclP09405 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
NclP09405 Gm37411-201ENSMUST00000194180 2282 ntBASIC20.6■□□□□ 0.89
NclP09405 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Gm29741-201ENSMUST00000192667 421 ntBASIC20.6■□□□□ 0.89
NclP09405 Cdk7-205ENSMUST00000225990 1159 ntBASIC20.6■□□□□ 0.89
NclP09405 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NclP09405 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
NclP09405 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NclP09405 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NclP09405 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NclP09405 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
NclP09405 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC20.59■□□□□ 0.89
NclP09405 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
NclP09405 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NclP09405 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.59■□□□□ 0.89
NclP09405 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NclP09405 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NclP09405 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NclP09405 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NclP09405 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NclP09405 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NclP09405 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NclP09405 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NclP09405 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NclP09405 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NclP09405 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC20.58■□□□□ 0.89
NclP09405 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC20.58■□□□□ 0.89
NclP09405 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC20.58■□□□□ 0.89
NclP09405 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NclP09405 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NclP09405 AC166997.1-201ENSMUST00000225122 572 ntBASIC20.58■□□□□ 0.89
NclP09405 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.58■□□□□ 0.89
NclP09405 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NclP09405 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms