Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.88□□□□□ -0.67
Hoxd3P09027 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.88□□□□□ -0.67
Hoxd3P09027 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm12467-201ENSMUST00000117625 745 ntBASIC10.88□□□□□ -0.67
Hoxd3P09027 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm28975-201ENSMUST00000186412 686 ntBASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm21470-201ENSMUST00000187680 696 ntBASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.88□□□□□ -0.67
Hoxd3P09027 CT009495.1-201ENSMUST00000224221 862 ntBASIC10.88□□□□□ -0.67
Hoxd3P09027 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxd3P09027 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxd3P09027 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm12859-201ENSMUST00000117834 427 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm29747-201ENSMUST00000194764 585 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm9797-201ENSMUST00000052902 613 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Gm26226-201ENSMUST00000082509 116 ntBASIC10.87□□□□□ -0.67
Hoxd3P09027 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.87□□□□□ -0.67
Hoxd3P09027 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxd3P09027 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms