Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.67□□□□□ -0.22
Hoxa4P06798 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm11524-201ENSMUST00000119349 807 ntBASIC13.67□□□□□ -0.22
Hoxa4P06798 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.67□□□□□ -0.22
Hoxa4P06798 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm43094-201ENSMUST00000196549 921 ntBASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxa4P06798 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.67□□□□□ -0.22
Hoxa4P06798 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm15823-201ENSMUST00000064305 670 ntBASIC13.67□□□□□ -0.22
Hoxa4P06798 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxa4P06798 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxa4P06798 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Gm45668-201ENSMUST00000211271 493 ntBASIC13.66□□□□□ -0.22
Hoxa4P06798 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.66□□□□□ -0.22
Hoxa4P06798 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxa4P06798 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hoxa4P06798 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.65□□□□□ -0.22
Hoxa4P06798 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.65□□□□□ -0.22
Hoxa4P06798 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Hoxa4P06798 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Hoxa4P06798 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms