Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.4□□□□□ -0.42
P06344 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P06344 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
P06344 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.4□□□□□ -0.42
P06344 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.4□□□□□ -0.43
P06344 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
P06344 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
P06344 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
P06344 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
P06344 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.39□□□□□ -0.43
P06344 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.39□□□□□ -0.43
P06344 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.39□□□□□ -0.43
P06344 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Gm12859-201ENSMUST00000117834 427 ntBASIC12.39□□□□□ -0.43
P06344 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.39□□□□□ -0.43
P06344 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Gm28760-201ENSMUST00000185995 736 ntBASIC12.39□□□□□ -0.43
P06344 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.39□□□□□ -0.43
P06344 Gm5425-201ENSMUST00000214125 459 ntBASIC12.39□□□□□ -0.43
P06344 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.39□□□□□ -0.43
P06344 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P06344 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P06344 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
P06344 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
P06344 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P06344 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
P06344 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.39□□□□□ -0.43
P06344 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
P06344 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.39□□□□□ -0.43
P06344 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
P06344 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06344 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
P06344 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
P06344 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.38□□□□□ -0.43
P06344 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06344 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
P06344 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06344 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.38□□□□□ -0.43
P06344 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
P06344 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.38□□□□□ -0.43
P06344 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.38□□□□□ -0.43
P06344 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.38□□□□□ -0.43
P06344 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.38□□□□□ -0.43
P06344 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.38□□□□□ -0.43
P06344 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
P06344 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
P06344 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.38□□□□□ -0.43
P06344 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.38□□□□□ -0.43
P06344 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
P06344 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06344 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06344 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.37□□□□□ -0.43
P06344 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.37□□□□□ -0.43
P06344 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06344 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06344 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms