Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Hoxa3P02831 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hoxa3P02831 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Gm12882-201ENSMUST00000121696 517 ntBASIC11.68□□□□□ -0.54
Hoxa3P02831 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.68□□□□□ -0.54
Hoxa3P02831 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hoxa3P02831 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.68□□□□□ -0.54
Hoxa3P02831 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.68□□□□□ -0.54
Hoxa3P02831 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.68□□□□□ -0.54
Hoxa3P02831 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
Hoxa3P02831 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa3P02831 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Gm15460-201ENSMUST00000118147 391 ntBASIC11.67□□□□□ -0.54
Hoxa3P02831 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Gm33320-201ENSMUST00000192232 530 ntBASIC11.67□□□□□ -0.54
Hoxa3P02831 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.67□□□□□ -0.54
Hoxa3P02831 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa3P02831 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa3P02831 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxa3P02831 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa3P02831 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms