Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.65□□□□□ -0.22
ClppO88696 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.64□□□□□ -0.23
ClppO88696 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.64□□□□□ -0.23
ClppO88696 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.64□□□□□ -0.23
ClppO88696 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.64□□□□□ -0.23
ClppO88696 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ClppO88696 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClppO88696 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ClppO88696 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.63□□□□□ -0.23
ClppO88696 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.63□□□□□ -0.23
ClppO88696 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.63□□□□□ -0.23
ClppO88696 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ClppO88696 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.63□□□□□ -0.23
ClppO88696 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.63□□□□□ -0.23
ClppO88696 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.63□□□□□ -0.23
ClppO88696 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Gm43703-201ENSMUST00000200523 763 ntBASIC13.63□□□□□ -0.23
ClppO88696 Gm44855-201ENSMUST00000205725 362 ntBASIC13.63□□□□□ -0.23
ClppO88696 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ClppO88696 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ClppO88696 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ClppO88696 Pck2-205ENSMUST00000226352 2784 ntBASIC13.63□□□□□ -0.23
ClppO88696 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.63□□□□□ -0.23
ClppO88696 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ClppO88696 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClppO88696 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.62□□□□□ -0.23
ClppO88696 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClppO88696 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.62□□□□□ -0.23
ClppO88696 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Gm4875-201ENSMUST00000118257 786 ntBASIC13.62□□□□□ -0.23
ClppO88696 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Gm29667-201ENSMUST00000190817 490 ntBASIC13.62□□□□□ -0.23
ClppO88696 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.62□□□□□ -0.23
ClppO88696 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.62□□□□□ -0.23
ClppO88696 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ClppO88696 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClppO88696 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClppO88696 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms